Browse of TCMCG051C12512 protein

CDS

Accession Number	TCMCG051C12512
gbkey	CDS
Protein Id	XP_024452575.1
Location	join(21577917..21577940,21579163..21579236,21579362..21579501,21579656..21579742,21579956..21580043,21580133..21580213,21580496..21580573,21580660..21580739,21581744..21581822,21581926..21582255,21582432..21582491,21583525..21583765,21585322..21585573,21586037..21587386,21587508..21587775,21587864..21587996,21588180..21588267,21588409..21588487,21588947..21589242,21589714..21590788,21591197..21591568,21592122..21592735)
Gene	LOC7461357
GeneID	7461357
Organism	Populus trichocarpa

Protein

Length	1962aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA17973
db_source	XM_024596807.1
Definition	mediator of RNA polymerase II transcription subunit 13 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTGGACCAATGTATTCAAAATTGGTGGTCTGCATCATGTATCATGGTTCCAGTTTCTCCCGAATGAATCTGATTTGAACTCTTTACCTGATAAGAGTGTAAAAGTAGAGCAGAAAGACTTTGCTACATGGCTTGTGCTTTCAGCTCATTTTCAGTTGCAGAAGGAGGGGTTTCTAAGCACATGGACCAATTCCTTTGTTGGACCTTGGGATCCATCACAAGGTCTACATAATCCTGATGAGAAAATAAAGCTCTGGCTTTTCCTTCCTGGACGTTACTCATCTGTTGTTGATAAGGCACAGGCTGCAGTGTCTAGATTAAGAGTTGTTGCATCTGGAGTTTGGGTGGCTCCTGGGGACTCTGAAGAGGTTGCAGCAGCCCTTTCTCAGTCTTTGAGGAATTATATAGAGAGAGCATTGACCGGGCATTCATACGTGAGGTTTGGAGATGTATTTTTAAAGTACCATCCATCTCAAAGTGAAGGACTTTCCAGGAAAGGACGGCCCACAGTTGAATTCATCTTTTCTGCCTCTGAGGAGGCGATCTTTGTGCACGCGATAATATCTGCAAAGCATATCCGTGCACTTTCAAATGGTGACGTGGAAAGAGTTTTAAAACAGTCTTCTTCTAATTCCAGTTATAGGCTTCCAGTGATCGCTTCTCCCCATGGAATTCGTGGTTCACTGACAGGATGTTGTCCAAATGATCTTGTCAAGCAAGTGTTCATGAGTTCTGGCAAGTCTAAGACATCGAATGGATTTATTGGCATGCCATATCATGTTTCTCAAGGGCCTGGCTGCCAGCTGAGGGAGCAAAATTGCTATGTTGAAATTACACTAGGTTGCCCAAGGTCAGAGAGTGACAAGGAATTGGAAACAAACTTGCAGTCAACTAAGAATTCATCCAAGAATCATATTGCAGAATCTCCTGCAGTAAGGAGAGGTGATCAGAAGGTATCACCAGATCACTTATCAGCTTATGAGAAAGCATTTATTTATCCAGTTGAAGCAATTGTTGTCCCAGTCTTGCCAAAATCTTTTGCCAGGTCTTCTTTGAAAAGATTTTGGCTACAAAATTGGATAGGGCCATCACTGCCTGGTTCATCATTCTTTATGCACTGTGGTGGTGATACAGATTTTCTGGAAGGATCTTGGATTGAATCTAATGGATTACGTATGCAGCACAGCTATAACAGTAGTAGCAATAGTAATAGTAGCAGCATCAGCTCCATAATTAGCGGCTCTAGTGATAGTGATTACAAGATGACCACCGGTGAGCTTGAGGCTGATGGTGATTCCTTGTCATGCAGACAATCCGGTTTATCTTCCAATGATCAGATGGAAATTGATGACCTCAAATTGGGTTCTAAGCGTCCTCGAACAGGAATGAATGAGCCATATGGTCAAGTGGGCACGGTTAAAAATGCTCCTATGCAAGAGTTTGGTTCGGTTGAAGTTAATGCTTCAGCTATTACAGGAATTGCAAATGAGCAGATTGGATCTCGTTGGGATTGGGATGATGACAGGGGTGCAGGAATGGATATCCAAGCTCTTCTCTCTGAATTTGGTGATTTTGGCGACTTCTTTGAGAATGATGATCTGCCTTTTGGAGAGCCTCCTGGAACAGCAGAGTCACAGGCTCTTATGTTTTCTGGTCCAGATTGTGGTGAAGTTGCTAACACTCCTATAGGAGTAATGGATGTTGTGGATCAGATGCTTCTGCCAGCAGCTTTCCCATCTTTCGAAAGTTTTAATCCATCTCCTGCAGTAGCCATAGATGAAAGTGCCAGCAAAAGCCAAGAAGCCACTCACGGTGCTCTGGCATTAGTTCCAGTGAACTGCACTCCACCATCTTCTTCAGGTGAGTTTGATTATTTAATCAAAGCCGAAGCTTTGTTGACATTTGCCCCAGAATATGGTGCAGTTGAAACCCCTACAAGCGAATTCTCCTCATCAATTTTCAGACGCCCATATTGTCCAAAATCTCGCCAAGTGGAGAGCTCAAATCCAAGTTCAAATAAGTATGCATATGGTGCAACACCACCACCTTCTCCTTTCTTTGAAGGATCAAATGAGAAAACTGGTATGCAGGTGAATCTGAAAACAGGTGCTGGAAGGAATGACACAAAAAAATATTACACTCTTGTGGAAAGTGGGAAAGTGCATCTTGATAGAAGAACTTTCATATTTAATGAAAGTCATCCTACAAGTGAGGTGATGGTGCCATCTCCATTATTGACTTCCAATTCCTCAAATACTGTCCAGAGGAAAATGAGCGATTGCATACTAGGAGCTGAAAATTTCTTATTTTCTATGAAGACTGTTCTGGCAACTGAAGTAGAATGCATTATGTTTCAAGCTTCCATGTGCAGTATGCGACACATGCTGTTGTCTTATGGTAACCCTACACCTGTAAATTTGAGTAGGTTAAGTGGAAGCACTGTTTTGAATCAGCTGCACGGTGATGCAAGTACCATGACGGACAGCATATCTGCCAGGTATGAAGTGAAGAAAAAAGAATCTATACCAGTTAGAATAGCTGGGGATATGGATGGGGGATTGCTAGATGGACACCTCAATGCACCTGTAGGTGTTTGGCGCTCTGTTGGAGTTCCTAAATTAACAAAACATACTAGTTCACCAAATATTGAAGTTAGCGCATCCTTGCCACACCATTCATTCAGCGAGGAAGGAATTCTCTCTTATAGGCAAAGGCAGCAGCCGCTGCAGGAGCTTTTGGATGGCATGGCATTGCTTGTCCAACAAGCTACTTCCTTCGTTGATGTGGCTCTGGATGCAGATTGTGGTGATGGTCCTTATGGTTGGCTTGCATTACAAGAACATTGGAGGCGTGGATTTTCTTGTGGGCCTTCCATGGTCCATGCAGGTTGTGGGGGGGCTTTGGCTGCTTGTCATTCTCTGGACATTGCTGGCGTAGAACTAGTTGATCCACTTTCTGCTGATATTCATTCTTCTGCAGTGATTAGCTTGCTGCAGTCTGAAATTAAAACAGCCTTAAAATCTGCATTTGGGAATTTGGACGGTCCATTATGTGTCACTGATTGGTGCAAAGGCCGCTTTCAGTCAGGTGATGGAGCAACCACATGTGATGGACTCATTGGGGAGTCCACTTTAAGTGGATGCAAAGATTCTTCAAGCATTGTAACACTGCCTGTTGGAGAACCAATGAGCCCAGCCCTCTCTTGTGCTGCTGGATCATCGTCCCTCAAAGCATCCAGTACATTGGATGGAGCTAAAGTGGATGAGACATCCCAAAGGAGATCAAACCAGGAAATAGAGCCAGAGCTGCGTTTCAGGATAAAGCCGACAGTGTTTGTTCTTCCCTCACCTGCTATTCTTGTTGGGTACCAGGACGATTGGCTTAAGACATCGGCAAGCTCTTTACAACTCTGGGAAAAGGCTCCTTTTGAACCATATGCTTCACCAAAACCAATTAGTTATTATGTTGTATGTCCAGACATCGATCCCCTTACTTCTGCTGCTGCAGATTTTTTCCAACAACTTGGAACTGTTTATGAAACTTGCAAACTGGGAACTCATTCACCTCAGAGTTTGGGAAACCATATGGAGATGGATGCTGGGAAATCTTTGTATACTGGTTTCGTACTACTTGATTGCCCTCAATCAATGAAGATAGAAAGCAGTAATGCATCTCTTGTGGGATCGATAAGTGATTATTTTCTCTCTCTCTCCAATGGTTGGGACTTGGCGAGCTATCTTAAGTCTCTCTCAAAAGCTGTCAAGGCTTTGAAAATTGGTCCATCATTATTGACAAACCCAAAAGAAGGAAGTAGCAGTTCTTGTATGGTTATCTATGTGGTGTGCCCCTTTCCTGAACCTGCTGCAGTTCTACAAACTGTCATTGAATCCTCTGTTGCTATTGGATCAATCATTCCCCCAGCTGATAGAGAGAGGAGGTCTATGTTGCTGGGTCAGGTCAGGAAAGCATTAAGCAGCTTGGCAGCTGTGGATGATGCATCAGCATCAAATGTTCTAGTACTTTCAGGGTTTAGCACTCCTAAATTGGTATTGCAAATCGTGACAGTTGATGCCATTTTTAGGGTTACAAGTCCAGCTCTTAATGAGCTCATCATTCTTAAGGAGACTGCTTTCACTGTCTATAATAAGGCTCGGCGAATTTCAAAAGGATCTTCAAATGATGTTCAGTCATCATCAGCGTCAAGTAGATCTCATTCGGCATTAACACAAATGAGTTCTGTTCCAGCAATGTGGAATTCTTTACCACGAGAGGCTGACATTGATTCTAGATTGAGAGCCGGTACCTGGGATAATTCCTGGCAAACAATGAGGACTGGAAGCTTGACCTGTGATCCAAACAGAAATGGAGATTTTTCTCTTCAAGATGAGATTCACTACATGTTTGAACCACTTTTTATTCTTTCAGAGCCTGGATCTCTGGAGCATGCTGTCACGCCTGCAGTTTTTGGTAATTTAGGCTCTGAATCTTTAAAGATGCAATCTGATGATAGCAGTGGAAGCTTCATGCAAAGTGCAAGCTCAGCAGGGAGTGTGGATACTGGATCTAGCTCTCAACATGATGGATCTGAGCCCACTGGCTTTGGATCTAGTCATCAAAAAGCACTTCCAAGCCTGCATTGCTGCTATGGATGGACAGAGGACTGGCGTTGGCTAGTTTGCATCTGGACAGACGCAAGAGGAGAATTGCTTGACAGCCATATATTCCCTTTTGGTGGAATTAGCAGTCGCCAGGATACAAAAGGTCTGCAATGCCTTTTTGTGCAAGTTTTGCAGCAAGGATGTCAGATACTTCAGTCTTGCTCCTCTCCTGATACCGGCAGTGTAAAGCCTAGAGATTTTGTGATTACTCGCATTGGAAGCTTCTTTGAGCTTGAGTACATAGAGTGGCAGAGAGCCATTTATTCAGTTGGGGGTTCTGAGGTGAAGAAATGGCCACTGCAACTACGGCGCTCAATGCCTGATGGGATGGCTGCAAGCACTAATGGTGCTTCCTTGCAGCAGCAGGAGATGAGTTTAATTCAAGAAAGAACCCTGCCTTCCTCACCTAGTCTATTGTATAGCCCTCTCTTGAAAGCATCTGGCTATATGAAGGGTGGTTTGGGGCAACCTTCTTCGAGAAAACAGCTTATGGGTGGGTACACTGTTGTTGACAACTCAAGGGGGATGCTTCAGTGGGTGCAGAGCATCACTCTTGTTACAATTTCAGTCGACCATTCTTTACATCTAATGTTTCAGGCTGATATGCCATCTCCTGTTTGTGTAGGAGGAAATGGCAGTAGTGTTGGCCCATCAATCTATCGGGAAGGTATCTCTCCTGTCAAGTCTCTTGGTTCAACATCCGCATCTTACATTTTGATTCCGTCACCCAGCATGCGCTTCCTTCCCCCAACACCTTTGCAGCACCCCACATGCCTCACTGCTGAATCCCCACCACTTGCTCATCTCCTTCATAGTAAGGGATCTGCAATTCCTCTCTCCACTGGTTTCGTGGTTTCAAAAGCTGTACCTTCCATGAGGAACGACTATAGGAGCGATGCAAGAGAAGAATGGCCTTCAGTTCTTTCTGTGAGTCTCATTGATTATTATGGAGATAACAACATGACCGAAGATAAAATGTATAGAGGGATTATGAAGCAAGGGGGACGGACTTTAGGCACAGATGGTAAAGATTTAGAAATCGGGACCCAATTAATTCTTGAAAACATCGCAGCAGAACTTCAAGCCCTATCTTGGATGACCGTGAGCCCAGCATACTTGGAGCGACGAACTGCTCTCCCATTTCATTGTGACATGGTTTTAAGACTCAGAAGACTGCTTCATTTTGCTGATAAAGAGCTCTCTTCACAGCCTGGTCGGTCACAGGTATAA

Protein:   MWTNVFKIGGLHHVSWFQFLPNESDLNSLPDKSVKVEQKDFATWLVLSAHFQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRYSSVVDKAQAAVSRLRVVASGVWVAPGDSEEVAAALSQSLRNYIERALTGHSYVRFGDVFLKYHPSQSEGLSRKGRPTVEFIFSASEEAIFVHAIISAKHIRALSNGDVERVLKQSSSNSSYRLPVIASPHGIRGSLTGCCPNDLVKQVFMSSGKSKTSNGFIGMPYHVSQGPGCQLREQNCYVEITLGCPRSESDKELETNLQSTKNSSKNHIAESPAVRRGDQKVSPDHLSAYEKAFIYPVEAIVVPVLPKSFARSSLKRFWLQNWIGPSLPGSSFFMHCGGDTDFLEGSWIESNGLRMQHSYNSSSNSNSSSISSIISGSSDSDYKMTTGELEADGDSLSCRQSGLSSNDQMEIDDLKLGSKRPRTGMNEPYGQVGTVKNAPMQEFGSVEVNASAITGIANEQIGSRWDWDDDRGAGMDIQALLSEFGDFGDFFENDDLPFGEPPGTAESQALMFSGPDCGEVANTPIGVMDVVDQMLLPAAFPSFESFNPSPAVAIDESASKSQEATHGALALVPVNCTPPSSSGEFDYLIKAEALLTFAPEYGAVETPTSEFSSSIFRRPYCPKSRQVESSNPSSNKYAYGATPPPSPFFEGSNEKTGMQVNLKTGAGRNDTKKYYTLVESGKVHLDRRTFIFNESHPTSEVMVPSPLLTSNSSNTVQRKMSDCILGAENFLFSMKTVLATEVECIMFQASMCSMRHMLLSYGNPTPVNLSRLSGSTVLNQLHGDASTMTDSISARYEVKKKESIPVRIAGDMDGGLLDGHLNAPVGVWRSVGVPKLTKHTSSPNIEVSASLPHHSFSEEGILSYRQRQQPLQELLDGMALLVQQATSFVDVALDADCGDGPYGWLALQEHWRRGFSCGPSMVHAGCGGALAACHSLDIAGVELVDPLSADIHSSAVISLLQSEIKTALKSAFGNLDGPLCVTDWCKGRFQSGDGATTCDGLIGESTLSGCKDSSSIVTLPVGEPMSPALSCAAGSSSLKASSTLDGAKVDETSQRRSNQEIEPELRFRIKPTVFVLPSPAILVGYQDDWLKTSASSLQLWEKAPFEPYASPKPISYYVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQSLGNHMEMDAGKSLYTGFVLLDCPQSMKIESSNASLVGSISDYFLSLSNGWDLASYLKSLSKAVKALKIGPSLLTNPKEGSSSSCMVIYVVCPFPEPAAVLQTVIESSVAIGSIIPPADRERRSMLLGQVRKALSSLAAVDDASASNVLVLSGFSTPKLVLQIVTVDAIFRVTSPALNELIILKETAFTVYNKARRISKGSSNDVQSSSASSRSHSALTQMSSVPAMWNSLPREADIDSRLRAGTWDNSWQTMRTGSLTCDPNRNGDFSLQDEIHYMFEPLFILSEPGSLEHAVTPAVFGNLGSESLKMQSDDSSGSFMQSASSAGSVDTGSSSQHDGSEPTGFGSSHQKALPSLHCCYGWTEDWRWLVCIWTDARGELLDSHIFPFGGISSRQDTKGLQCLFVQVLQQGCQILQSCSSPDTGSVKPRDFVITRIGSFFELEYIEWQRAIYSVGGSEVKKWPLQLRRSMPDGMAASTNGASLQQQEMSLIQERTLPSSPSLLYSPLLKASGYMKGGLGQPSSRKQLMGGYTVVDNSRGMLQWVQSITLVTISVDHSLHLMFQADMPSPVCVGGNGSSVGPSIYREGISPVKSLGSTSASYILIPSPSMRFLPPTPLQHPTCLTAESPPLAHLLHSKGSAIPLSTGFVVSKAVPSMRNDYRSDAREEWPSVLSVSLIDYYGDNNMTEDKMYRGIMKQGGRTLGTDGKDLEIGTQLILENIAAELQALSWMTVSPAYLERRTALPFHCDMVLRLRRLLHFADKELSSQPGRSQV